Welcome to Carleton Bioinformatics!¶
- Week 3: Introduction to Unix/Linux and the Server; Assembly with IDBA-UD
- Week 4: Calling open reading frames with Prodigal, using BLAST, annotating genes with Interproscan
- Week 5: Aligning with MUSCLE and Making Trees with RAxML
- Week 6: Mapping with Bowtie2
- Week 7: Binning Genomes with Anvi’o
- Week 8: Classifying taxonomy of short reads with mothur